Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909198.1_cds_XP_016459424.1_52954
CDS Infomation

[gene=LOC107782982] [db_xref=GeneID:107782982] [protein=uncharacterized protein LOC107782982] [protein_id=XP_016459424.1] [location=complement(join(19569..20587,20683..21353,21653..22761))] [gbkey=CDS]
Sequence

ATGGGATTAGCTAGGAATGCTGATATGAGAAGTGTGGATTCTTTAGATGGAATGGGGAGT
GAATCTATGGGAGGAAAGGCTAAAACGAGACAACAAAAGAGCAGTTGCACAAGGCTTGTT
ACTGTTTTAACTTGTTTACAATTCTCATTTGCTGTTTATGCAACATTTCTTCTATATTAC
ATGAGCCCCTCTCTAGATTTAAGGACTACACCAGACTTCAGTTGGACAACAAGAATTGCT
CAGCAATGGAAGCAATTTATTATCCCTCCCCACGTCGTTACTCGTAATAATCAGGATGCT
AATTCAGTTGTTAGAGCTGAAACTCAACCAATAGTTAATCCCTATGAAGTCTGTGAATAT
GAGAAGATTGATTTTGTACAGAAGAAGTCGAACGATGCTGGCACGATCAAGTTGAAGACT
GAGCTTTATCAAGAAGTGCTAGATTTTCAAAGCAAGTCCCTTGGTGCTGAGACTCTTTCT
GAGCTAATGTCAATGAAGTCCAAGTGGGATTTGCGCGGTCCAAACAAACCAAAAATTACA
GTAATCTTGAATCATTTCAAGAGGAAAACGCTTTGTGCGCAACTTGACTCTTTGCTAGAC
CAGACTCTCCCATTTCATCATGTTTGGGTACTTTCATTTGGAAGTCCAAATGAGCAATCA
TTAAAGAAAATTGTGGACAGATATAATGATTCAAGAATAAGCTTTATCAGTTCAAGATAT
GATTTCAAGTACTATGGAAGATTCCAACTCGCTTTACAAACAGAAGCTGACCTTGTATAT
ATCCTAGATGATGACATGATTCCAGGGAAGAAAATGCTGCAAATTCTAGCACATGTGGCA
GGGACAGACAAGTATAAAAATTCTGTTTTGGGGAGCATTGGTAGGATTTTGCCTTTTAGA
CAGAAGGATTCTAGTTTTCCAAGCTATAGGAAGTTTCGATCGAAGGAAGCAGGGCTTTAT
TTGCCTGATCCTGCTTATAATATTACTGTGGACAAAATTGTTCAGGTGGATTTCCTCTCC
AGTTCTTGGTTTATGTCTGCTGAACTTGTCAAGACACTTTTCATTGAGACACCATTCACT
TTCATGACAGGGGAAGACTTGCACTTAAGCTATCAGCTTCAGAAGTACAGAAATACTGGT
TCATTTGTGCTACCAGTAGATCCAAATGATAAAGAAACTTGGGGTGATAGTGAGCATAGA
CTTGCCTACGTATCCGAAACAACTGTAATTTTCAAGGATGTTGTTCAAGTTCGAGATGAT
CAATGGTGGAGAGCACTCTCTACTGGTTATATTACACAATGGGCAGCAATGTATCCTGAA
AAAATCGATGCACTCTTCTATGCCCACTCTATCAATGAAGTTAAAGCTCTAGCGCCTCTT
CTTGAAAAGTTCAGATCAACTGTTGGAAAGAAGGCCTATATCATTATCTCAGGAGGCAAT
TTTTGCCCTTGTGAAGATGCTGCTACAGCTTTGAAATGGCCTAAGGCAGTATGCAAAGAA
AGAAGATTCAAGATTATGGATATAGGAGTTGGTGCTTTATTAGGAACTTCAAATTCGGAG
GTGCCTGTTGTTCAAGCAGTGTATGCTAGCATGAAAGGACTTATCAAAATTCATAATCCT
AGCCTGGTGATTACAGTAGCTGATGCAGACTCTAATGTGAAGAAAGCTCTAAATATGGCT
ACAGAGGCTAATACTAACAGTTCAACGCTCGTTCTTCTACCTAGATCATCGGTGCCAAAG
GTTCTGTGGATGGCTGATCTTCGTTCCACAGCATTGCCAAATTGGAATAGGATGAGGATT
TCTGTAAATATCATCACACAGAACAGAGTTAATTCACTAGCAAGGCTTCTCAAATCTCTT
AGTGATGCACACTATATTGGTGATGAAGTTTATATTACTTTCAACATGGATAGCAAGGTG
GATGAAGCAACGCTAAAGCTTGTCAACTCATTTAATTGGCCTCATGGACCCAAAATTATT
CGAAGAAGAATCATTCAAGGAGGCCTCATTCGAGCTGTGAGCGAGAGTTGGTACCCCTCC
TCCGATGATGATTTTGGGCTCTTACTTGAAGATGACATTGAAGTATCCCCTTACTTTTAC
CTTTGGATAAAATATGCTCTCTTGACCTATCACTATGACCCTGAAATATTACTTCCTGAG
CTCTCGGCCATCTCTCTTTATACTCCTAGATTGGTGGAAGTGGTAAAAGAAAGGCCTAAA
TGGAATGCAACAGATTTCTTCAAACACATTCATCCTAACACACCTTATCTCCACCAGTTG
CCTTGCAGTTGGGGTGCAGTTTTCTTTCCCAAGCAATGGCGGGAATTCTACGTTTACATG
AACATGAGATTCACAAAAGATGCCAAGCAAAATCCTGTTCAAATCCCAAGATCAAGAACA
AATGGTTGGCAAGCTTCTTGGAAGAAGTTTTTAATAGACATGATGTATTTAAGAGGGTAT
GTTACCCTTTATCCGAACTTTCCAAATCAAACAAGCTTTTCAACCAATCATATGGAACCA
GGAGCTCATATCGCTGCTAAGGAAAATGTGATTAAGCATAACAAGGTTGATTTCGAGGTG
CCATTGCTGAAGGAAGACTTCAGAAACTTTTGGCCAAATGGAAAAATGCCTGCAGCTTCA
AAATTGCCTTCATTAAACCTCTTCAATCAGCCTATTTCTCTCAAGGGCTTAAAGGCGGCT
GGAGCAAAACTGGGGCAAGATATTCTTAGATACAATCCAACAGAGGTAGTAGTAGTTAAC
CATGAGACAGGTCTACCTTCAAATTGTGCAAGATTCTGA

Peptide Sequence

PEP ID

XP_016459424.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107782982 [Nicotiana tabacum]
Sequence

MGLARNADMRSVDSLDGMGSESMGGKAKTRQQKSSCTRLVTVLTCLQFSFAVYATFLLYY
MSPSLDLRTTPDFSWTTRIAQQWKQFIIPPHVVTRNNQDANSVVRAETQPIVNPYEVCEY
EKIDFVQKKSNDAGTIKLKTELYQEVLDFQSKSLGAETLSELMSMKSKWDLRGPNKPKIT
VILNHFKRKTLCAQLDSLLDQTLPFHHVWVLSFGSPNEQSLKKIVDRYNDSRISFISSRY
DFKYYGRFQLALQTEADLVYILDDDMIPGKKMLQILAHVAGTDKYKNSVLGSIGRILPFR
QKDSSFPSYRKFRSKEAGLYLPDPAYNITVDKIVQVDFLSSSWFMSAELVKTLFIETPFT
FMTGEDLHLSYQLQKYRNTGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDVVQVRDD
QWWRALSTGYITQWAAMYPEKIDALFYAHSINEVKALAPLLEKFRSTVGKKAYIIISGGN
FCPCEDAATALKWPKAVCKERRFKIMDIGVGALLGTSNSEVPVVQAVYASMKGLIKIHNP
SLVITVADADSNVKKALNMATEANTNSSTLVLLPRSSVPKVLWMADLRSTALPNWNRMRI
SVNIITQNRVNSLARLLKSLSDAHYIGDEVYITFNMDSKVDEATLKLVNSFNWPHGPKII
RRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYFYLWIKYALLTYHYDPEILLPE
LSAISLYTPRLVEVVKERPKWNATDFFKHIHPNTPYLHQLPCSWGAVFFPKQWREFYVYM
NMRFTKDAKQNPVQIPRSRTNGWQASWKKFLIDMMYLRGYVTLYPNFPNQTSFSTNHMEP
GAHIAAKENVIKHNKVDFEVPLLKEDFRNFWPNGKMPAASKLPSLNLFNQPISLKGLKAA
GAKLGQDILRYNPTEVVVVNHETGLPSNCARF

Transcript Sequence

Gene sequence data has not been registered.